Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | BK658_07385 | Not Available | Positive | 1582862 - 1583065 | 7071.93 |
| cytochrome c oxidase subunit 3 | BK658_07390 | Not Available | Negative | 1583074 - 1583961 | 33278.9 |
| cytochrome c oxidase assembly protein | BK658_07395 | Not Available | Negative | 1583996 - 1584553 | 20594.0 |
| cytochrome c oxidase subunit i | BK658_07400 | Not Available | Negative | 1584686 - 1586281 | 58976.4 |
| cytochrome c oxidase subunit ii | BK658_07405 | Not Available | Negative | 1586364 - 1587491 | 42019.9 |
| hypothetical protein | BK658_07410 | Not Available | Positive | 1587865 - 1588515 | 24058.6 |
| sulp family inorganic anion transporter | BK658_07415 | Not Available | Negative | 1588574 - 1590112 | 53294.1 |
| carbonate dehydratase | BK658_07420 | Not Available | Negative | 1590202 - 1590933 | 26563.9 |
| radical sam protein | BK658_07425 | Not Available | Negative | 1591178 - 1592236 | 39473.7 |
| hypothetical protein | BK658_07430 | Not Available | Positive | 1592481 - 1592783 | 10963.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
