Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_07335 | Not Available | Positive | 1574347 - 1575135 | 27281.9 |
| hypothetical protein | BK658_07340 | Not Available | Positive | 1575173 - 1575886 | 25709.8 |
| methionine abc transporter atp-binding protein | BK658_07345 | Not Available | Positive | 1576113 - 1577120 | 36554.1 |
| metal abc transporter permease | BK658_07350 | Not Available | Positive | 1577120 - 1577794 | 23970.4 |
| methionine abc transporter substrate-binding protein | BK658_07355 | Not Available | Positive | 1577856 - 1578629 | 27847.7 |
| cytochrome c oxidase assembly protein | BK658_07360 | Not Available | Negative | 1578887 - 1579522 | 22920.0 |
| protoheme ix farnesyltransferase | BK658_07365 | Not Available | Negative | 1579519 - 1580418 | 32710.0 |
| cytochrome b | BK658_07370 | Not Available | Negative | 1580406 - 1581485 | 38996.7 |
| hypothetical protein | BK658_07375 | Not Available | Negative | 1581496 - 1582086 | 21896.5 |
| cytochrome oxidase biogenesis protein surf1,facilitates heme a insertion | BK658_07380 | Not Available | Negative | 1582052 - 1582792 | 27881.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
