Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_07235 | Not Available | Negative | 1551505 - 1552734 | 43262.3 |
| glutamate/aspartate:proton symporter gltp | BK658_07240 | Not Available | Negative | 1552954 - 1554285 | 47803.9 |
| duf1328 domain-containing protein | BK658_07245 | Not Available | Negative | 1555048 - 1555212 | 5696.35 |
| hypothetical protein | BK658_07250 | Not Available | Negative | 1555286 - 1555573 | 10547.8 |
| sigma-54-dependent fis family transcriptional regulator | BK658_07255 | Not Available | Positive | 1556016 - 1557362 | 49558.3 |
| pas domain-containing sensor histidine kinase | BK658_07260 | Not Available | Positive | 1557373 - 1559163 | 66574.3 |
| cyclic diguanylate phosphodiesterase | BK658_07265 | Not Available | Negative | 1559171 - 1560784 | 59536.9 |
| n-acetylmuramoyl-l-alanine amidase | BK658_07270 | Not Available | Negative | 1560861 - 1561640 | 29035.6 |
| hypothetical protein | BK658_07275 | Not Available | Negative | 1561740 - 1563893 | 78924.7 |
| endonuclease | BK658_07280 | Not Available | Negative | 1563890 - 1564768 | 32659.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
