Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK658_07135 | Not Available | Positive | 1530613 - 1531533 | 34561.4 |
| nadp transhydrogenase subunit alpha | BK658_07140 | Not Available | Positive | 1531964 - 1533085 | 38810.2 |
| nad(p)(+) transhydrogenase | BK658_07145 | Not Available | Positive | 1533101 - 1533424 | 11409.6 |
| nad synthetase | BK658_07150 | Not Available | Positive | 1533424 - 1534860 | 49954.2 |
| propionyl-coa--succinate coa transferase | BK658_07155 | Not Available | Positive | 1535053 - 1536546 | 53863.9 |
| hypothetical protein | BK658_07160 | Not Available | Positive | 1536866 - 1537081 | 8384.11 |
| hypothetical protein | BK658_07165 | Not Available | Positive | 1537352 - 1537555 | 7725.56 |
| holliday junction resolvasome, helicase subunit | BK658_07170 | Not Available | Positive | 1537736 - 1538053 | 10937.0 |
| holliday junction resolvase | BK658_07175 | Not Available | Positive | 1538160 - 1538468 | 11119.3 |
| hypothetical protein | BK658_07180 | Not Available | Positive | 1538495 - 1538815 | 11358.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
