Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | BK658_06975 | Not Available | Positive | 1498123 - 1499433 | 47391.4 |
| sugar abc transporter permease | BK658_06980 | Not Available | Positive | 1499577 - 1500503 | 33522.0 |
| sugar abc transporter permease | BK658_06985 | Not Available | Positive | 1500512 - 1501342 | 30853.6 |
| abc transporter atp-binding protein | BK658_06990 | Not Available | Positive | 1501378 - 1502481 | 40167.9 |
| mannitol dehydrogenase | BK658_06995 | Not Available | Positive | 1502497 - 1503972 | 54431.1 |
| xylulokinase | BK658_07000 | Not Available | Positive | 1504096 - 1505589 | 52910.2 |
| carbohydrate kinase | BK658_07005 | Not Available | Positive | 1505603 - 1506547 | 34406.0 |
| type iv secretion protein rhs | BK658_07010 | Not Available | Positive | 1506721 - 1509144 | 90011.0 |
| hypothetical protein | BK658_07015 | Not Available | Positive | 1510167 - 1510877 | 26464.4 |
| hypothetical protein | BK658_07020 | Not Available | Positive | 1510882 - 1511391 | 18981.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
