Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconate dehydrogenase (decarboxylating) | BK658_06925 | Not Available | Negative | 1483329 - 1484309 | 35155.8 |
| hypothetical protein | BK658_06930 | Not Available | Positive | 1484925 - 1486670 | 65823.0 |
| tonb-dependent receptor | BK658_06935 | Not Available | Positive | 1486841 - 1489087 | 83009.2 |
| gnat family n-acetyltransferase | BK658_06940 | Not Available | Negative | 1489349 - 1489840 | 17648.5 |
| acyl-coa--6-aminopenicillanic acid acyltransferase | BK658_06945 | Not Available | Positive | 1490259 - 1491383 | 40925.0 |
| peptide abc transporter substrate-binding protein | BK658_06950 | Not Available | Positive | 1491502 - 1493064 | 57222.0 |
| peptide abc transporter | BK658_06955 | Not Available | Positive | 1493075 - 1494016 | 33789.6 |
| peptide abc transporter permease | BK658_06960 | Not Available | Positive | 1494121 - 1494873 | 27208.9 |
| peptide abc transporter atp-binding protein | BK658_06965 | Not Available | Positive | 1494876 - 1496525 | 60103.7 |
| porin | BK658_06970 | Not Available | Positive | 1496629 - 1497903 | 47113.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
