Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | BK658_06775 | Not Available | Negative | 1451066 - 1452193 | 40630.6 |
| acetyl-coa acetyltransferase | BK658_06780 | Not Available | Negative | 1452349 - 1453542 | 41368.3 |
| 3-hydroxyacyl-coa dehydrogenase | BK658_06785 | Not Available | Negative | 1453555 - 1454316 | 25769.6 |
| amp-binding protein | BK658_06790 | Not Available | Negative | 1454333 - 1455997 | 60169.6 |
| arac family transcriptional regulator | BK658_06795 | Not Available | Negative | 1456247 - 1457263 | 38585.7 |
| iron transporter | BK658_06800 | Not Available | Positive | 1457489 - 1458340 | 30187.8 |
| multidrug dmt transporter permease | BK658_06805 | Not Available | Positive | 1458349 - 1459548 | 42934.2 |
| peroxidase | BK658_06810 | Not Available | Positive | 1459566 - 1460864 | 46993.0 |
| efem/efeo family lipoprotein | BK658_06815 | Not Available | Positive | 1460899 - 1461723 | 29910.3 |
| mfs transporter | BK658_06820 | Not Available | Positive | 1461966 - 1463162 | 41210.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
