Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | BK658_06670 | Not Available | Positive | 1429970 - 1430491 | 19144.7 |
| lysr family transcriptional regulator | BK658_06675 | Not Available | Negative | 1430755 - 1431720 | 35567.6 |
| argininosuccinate lyase | BK658_06680 | Not Available | Positive | 1432014 - 1433441 | 52162.4 |
| abc transporter permease | BK658_06685 | Not Available | Positive | 1433632 - 1434507 | 32354.4 |
| ectoine/hydroxyectoine abc transporter atp-binding protein ehua | BK658_06690 | Not Available | Positive | 1434528 - 1435292 | 28157.3 |
| abc transporter substrate-binding protein | BK658_06695 | Not Available | Positive | 1435317 - 1436141 | 29684.6 |
| polysaccharide deacetylase | BK658_06700 | Not Available | Positive | 1436286 - 1437131 | 32368.4 |
| polysaccharide deacetylase | BK658_06705 | Not Available | Positive | 1437124 - 1438011 | 32978.0 |
| mfs transporter | BK658_06715 | Not Available | Positive | 1439482 - 1440681 | 43294.4 |
| hypothetical protein | BK658_06720 | Not Available | Positive | 1440815 - 1441522 | 24911.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
