Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | BK658_06620 | Not Available | Positive | 1417934 - 1419040 | 39086.9 |
| udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase | BK658_06625 | Not Available | Positive | 1419500 - 1420639 | 41630.0 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | BK658_06630 | Not Available | Positive | 1420645 - 1421664 | 37719.9 |
| bifunctional udp-glucuronic acid oxidase/udp-4-amino-4-deoxy-l-arabinose formyltransferase | BK658_06635 | Not Available | Positive | 1421661 - 1423652 | 73990.4 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | BK658_06640 | Not Available | Positive | 1423652 - 1424536 | 32830.2 |
| 4-amino-4-deoxy-l-arabinose lipid a transferase | BK658_06645 | Not Available | Positive | 1424533 - 1426182 | 61737.6 |
| 4-amino-4-deoxy-l-arabinose-phospho-udp flippase | BK658_06650 | Not Available | Positive | 1426179 - 1426523 | 12756.2 |
| 4-amino-4-deoxy-l-arabinose-phospho-udp flippase | BK658_06655 | Not Available | Positive | 1426520 - 1426933 | 14654.2 |
| udp-glucose 6-dehydrogenase | BK658_06660 | Not Available | Positive | 1426930 - 1428309 | 51079.5 |
| glycosyltransferase | BK658_06665 | Not Available | Positive | 1428320 - 1429927 | 58421.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
