Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter periplasmic adaptor subunit | BK658_06570 | Not Available | Negative | 1404586 - 1405779 | 42106.4 |
| multidrug transporter | BK658_06575 | Not Available | Negative | 1405776 - 1407176 | 49994.1 |
| dna-binding response regulator | BK658_06580 | Not Available | Negative | 1407281 - 1407970 | 25320.4 |
| dna-binding response regulator | BK658_06585 | Not Available | Positive | 1408091 - 1408783 | 25779.0 |
| two-component sensor histidine kinase | BK658_06590 | Not Available | Positive | 1408761 - 1410134 | 50669.7 |
| histidine phosphatase family protein | BK658_06595 | Not Available | Positive | 1410570 - 1411112 | 19371.8 |
| 4-amino-4-deoxy-l-arabinose lipid a transferase | BK658_06600 | Not Available | Positive | 1411642 - 1413291 | 61951.1 |
| dolichyl-phosphate-mannose--protein mannosyltransferase | BK658_06605 | Not Available | Positive | 1413448 - 1414983 | 57787.6 |
| iron abc transporter substrate-binding protein | BK658_06610 | Not Available | Positive | 1415303 - 1416319 | 35899.7 |
| iron abc transporter permease | BK658_06615 | Not Available | Positive | 1416369 - 1417937 | 55838.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
