Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carnitine dehydratase | BK658_06420 | Not Available | Positive | 1376747 - 1378228 | 52922.3 |
| flavin reductase | BK658_06425 | Not Available | Positive | 1378241 - 1378726 | 17125.6 |
| succinate-semialdehyde dehydrogenase (nadp(+)) | BK658_06430 | Not Available | Positive | 1378873 - 1380348 | 52454.9 |
| 4-carboxymuconolactone decarboxylase | BK658_06435 | Not Available | Positive | 1380345 - 1380734 | 14602.5 |
| gntr family transcriptional regulator | BK658_06440 | Not Available | Positive | 1380820 - 1381572 | 28049.1 |
| nudix hydrolase | BK658_06445 | Not Available | Positive | 1381575 - 1382138 | 21193.4 |
| hypothetical protein | BK658_06450 | Not Available | Negative | 1382145 - 1382438 | 10947.8 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | BK658_06455 | Not Available | Positive | 1382510 - 1383619 | 40191.3 |
| abc transporter substrate-binding protein | BK658_06460 | Not Available | Positive | 1383847 - 1384872 | 36859.8 |
| abc transporter permease | BK658_06465 | Not Available | Positive | 1384869 - 1385813 | 33856.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
