Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sorbitol dehydrogenase | BK658_06250 | Not Available | Negative | 1340148 - 1340921 | 27235.5 |
| hypothetical protein | BK658_06255 | Not Available | Positive | 1340974 - 1341183 | 7396.92 |
| sugar abc transporter substrate-binding protein | BK658_06260 | Not Available | Negative | 1341329 - 1342636 | 47771.7 |
| porin | BK658_06270 | Not Available | Negative | 1344059 - 1345378 | 47406.2 |
| phosphodiesterase | BK658_06275 | Not Available | Negative | 1345569 - 1346399 | 31001.2 |
| abc transporter atp-binding protein | BK658_06280 | Not Available | Negative | 1346423 - 1347454 | 37084.9 |
| abc transporter permease | BK658_06285 | Not Available | Negative | 1347451 - 1348245 | 28756.3 |
| abc transporter permease | BK658_06290 | Not Available | Negative | 1348242 - 1349063 | 28855.0 |
| abc transporter substrate-binding protein | BK658_06295 | Not Available | Negative | 1349112 - 1350116 | 36029.2 |
| gntr family transcriptional regulator | BK658_06300 | Not Available | Negative | 1350100 - 1351119 | 36934.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
