Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose-bisphosphate aldolase | BK658_06200 | Not Available | Negative | 1328043 - 1329071 | 36834.5 |
| glucose-6-phosphate isomerase | BK658_06205 | Not Available | Negative | 1329128 - 1330783 | 61899.9 |
| dna repair protein | BK658_06210 | Not Available | Negative | 1331006 - 1331551 | 20518.8 |
| succinate dehydrogenase iron-sulfur subunit | BK658_06215 | Not Available | Negative | 1331633 - 1332337 | 26846.4 |
| nitric-oxide reductase large subunit | BK658_06220 | Not Available | Positive | 1332658 - 1334982 | 86604.1 |
| hypothetical protein | BK658_06225 | Not Available | Positive | 1335007 - 1335219 | 7834.2 |
| asnc family transcriptional regulator | BK658_06230 | Not Available | Negative | 1335637 - 1336137 | 18641.4 |
| acetylpolyamine amidohydrolase | BK658_06235 | Not Available | Positive | 1336257 - 1337291 | 37946.6 |
| ornithine cyclodeaminase | BK658_06240 | Not Available | Positive | 1337342 - 1338394 | 38443.9 |
| amino acid transporter | BK658_06245 | Not Available | Positive | 1338555 - 1339970 | 51176.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
