Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-seryl-trna(sec) selenium transferase | BK658_06140 | Not Available | Positive | 1316065 - 1317495 | 51408.7 |
| selenocysteine-specific translation elongation factor | BK658_06145 | Not Available | Positive | 1317492 - 1319411 | 70504.2 |
| magnesium transporter | BK658_06155 | Not Available | Negative | 1319571 - 1320584 | 36908.7 |
| hypothetical protein | BK658_06160 | Not Available | Positive | 1321437 - 1322435 | 35823.9 |
| cupin | BK658_06170 | Not Available | Positive | 1323215 - 1323559 | 12474.9 |
| recombinase | BK658_06175 | Not Available | Negative | 1323607 - 1324587 | 36751.2 |
| integrase | BK658_06180 | Not Available | Positive | 1324769 - 1325761 | 37667.2 |
| thymidylate kinase | BK658_06185 | Not Available | Negative | 1326337 - 1326948 | 22775.4 |
| hypothetical protein | BK658_06190 | Not Available | Positive | 1327159 - 1327425 | 10219.4 |
| histidine phosphatase family protein | BK658_06195 | Not Available | Negative | 1327444 - 1328046 | 22241.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
