Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter | BK658_06090 | Not Available | Negative | 1303662 - 1304498 | 30274.7 |
| fad-binding oxidoreductase | BK658_06095 | Not Available | Negative | 1304624 - 1306000 | 49433.5 |
| alpha-hydroxy-acid oxidizing enzyme | BK658_06100 | Not Available | Negative | 1306005 - 1307201 | 43616.7 |
| histidine ammonia-lyase | BK658_06105 | Not Available | Negative | 1307263 - 1308792 | 54021.1 |
| oxidoreductase | BK658_06110 | Not Available | Positive | 1309210 - 1310175 | 35492.9 |
| sulfate abc transporter substrate-binding protein | BK658_06115 | Not Available | Positive | 1310381 - 1310971 | 21451.5 |
| formate dehydrogenase-n subunit alpha | BK658_06120 | Not Available | Positive | 1311020 - 1313446 | 90053.8 |
| formate dehydrogenase subunit beta | BK658_06125 | Not Available | Positive | 1313446 - 1314396 | 34385.8 |
| formate dehydrogenase subunit gamma | BK658_06130 | Not Available | Positive | 1314393 - 1315046 | 25128.4 |
| formate dehydrogenase accessory protein fdhe | BK658_06135 | Not Available | Positive | 1315051 - 1315977 | 33516.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
