Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine sulfinate desulfinase | BK658_06040 | Not Available | Positive | 1294432 - 1295706 | 46008.6 |
| suf system nifu family fe-s cluster assembly protein | BK658_06045 | Not Available | Positive | 1295703 - 1296161 | 16330.6 |
| putative fe-s cluster assembly protein suft | BK658_06050 | Not Available | Positive | 1296465 - 1297001 | 19333.2 |
| thioredoxin | BK658_06055 | Not Available | Positive | 1297026 - 1299014 | 74555.9 |
| alkylhydroperoxidase | BK658_06060 | Not Available | Positive | 1299057 - 1299413 | 12611.9 |
| histidine utilization repressor | BK658_06065 | Not Available | Negative | 1299448 - 1300185 | 27619.3 |
| histidinol-phosphate transaminase | BK658_06070 | Not Available | Negative | 1300185 - 1301321 | 41101.4 |
| atp-binding protein | BK658_06075 | Not Available | Negative | 1301318 - 1302157 | 30890.5 |
| amino acid abc transporter | BK658_06080 | Not Available | Negative | 1302259 - 1302930 | 24152.6 |
| amino acid abc transporter | BK658_06085 | Not Available | Negative | 1302927 - 1303586 | 23576.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
