Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | BK658_05885 | Not Available | Negative | 1262755 - 1263636 | 32514.8 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | BK658_05890 | Not Available | Negative | 1263633 - 1264178 | 20786.5 |
| glucose-1-phosphate thymidylyltransferase | BK658_05895 | Not Available | Negative | 1264175 - 1265050 | 32442.6 |
| dtdp-glucose 4,6-dehydratase | BK658_05900 | Not Available | Negative | 1265047 - 1266129 | 40219.4 |
| hypothetical protein | BK658_05905 | Not Available | Positive | 1266521 - 1269433 | 106373.0 |
| n-carbamoylputrescine amidase | BK658_05910 | Not Available | Positive | 1269737 - 1270615 | 32794.6 |
| agmatine deiminase | BK658_05915 | Not Available | Positive | 1270621 - 1271727 | 40623.9 |
| hypothetical protein | BK658_05920 | Not Available | Positive | 1271975 - 1272175 | 7574.09 |
| protein-disulfide isomerase | BK658_05925 | Not Available | Positive | 1272389 - 1273084 | 24837.5 |
| ketosteroid isomerase | BK658_05930 | Not Available | Positive | 1273111 - 1273506 | 14555.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
