Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taurine abc transporter permease | BK658_05685 | Not Available | Negative | 1221151 - 1221990 | 29643.2 |
| taurine transporter atp-binding subunit | BK658_05690 | Not Available | Negative | 1221987 - 1222781 | 28852.0 |
| taurine abc transporter substrate-binding protein | BK658_05695 | Not Available | Negative | 1222798 - 1223775 | 34595.5 |
| glutamate--cysteine ligase | BK658_05700 | Not Available | Negative | 1224050 - 1225633 | 59057.1 |
| hypothetical protein | BK658_05705 | Not Available | Negative | 1225848 - 1226231 | 13417.4 |
| rna-binding transcriptional accessory protein | BK658_05710 | Not Available | Negative | 1226231 - 1228555 | 84736.5 |
| two-component system response regulator ompr | BK658_05715 | Not Available | Positive | 1228917 - 1229657 | 27389.1 |
| two-component sensor histidine kinase | BK658_05720 | Not Available | Positive | 1229766 - 1231079 | 48770.0 |
| ribosomal protein s6 modification protein | BK658_05725 | Not Available | Negative | 1231236 - 1232141 | 32575.1 |
| ribosomal protein s6 modification protein | BK658_05730 | Not Available | Negative | 1232138 - 1232620 | 17711.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
