Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_05635 | Not Available | Negative | 1210196 - 1211017 | 30099.4 |
| l-cystine abc transporter atp-binding protein yecc | BK658_05640 | Not Available | Negative | 1211497 - 1212243 | 27533.6 |
| amino acid abc transporter permease | BK658_05645 | Not Available | Negative | 1212248 - 1212913 | 24539.4 |
| cystine abc transporter substrate-binding protein | BK658_05650 | Not Available | Negative | 1212913 - 1213707 | 28579.4 |
| d-cysteine desulfhydrase | BK658_05655 | Not Available | Negative | 1214094 - 1215086 | 35032.1 |
| serine acetyltransferase | BK658_05660 | Not Available | Positive | 1215281 - 1216207 | 33483.1 |
| choline transporter | BK658_05665 | Not Available | Positive | 1216513 - 1218513 | 73515.6 |
| hypothetical protein | BK658_05670 | Not Available | Negative | 1218530 - 1218787 | 9150.77 |
| l-glyceraldehyde 3-phosphate reductase | BK658_05675 | Not Available | Positive | 1219029 - 1220066 | 38085.2 |
| taurine dioxygenase | BK658_05680 | Not Available | Negative | 1220184 - 1221026 | 31487.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
