Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty acid desaturase | BK658_05535 | Not Available | Positive | 1187521 - 1188594 | 40645.6 |
| hypothetical protein | BK658_05540 | Not Available | Positive | 1188841 - 1189167 | 11531.2 |
| alpha/beta hydrolase | BK658_05545 | Not Available | Positive | 1189820 - 1190401 | 21314.3 |
| fis family transcriptional regulator | BK658_05550 | Not Available | Positive | 1190457 - 1191392 | 33814.4 |
| methionine abc transporter substrate-binding protein | BK658_05555 | Not Available | Positive | 1191596 - 1192378 | 28085.1 |
| polar amino acid abc transporter permease | BK658_05560 | Not Available | Positive | 1192992 - 1193657 | 24254.6 |
| glutamine abc transporter permease | BK658_05565 | Not Available | Positive | 1193638 - 1194297 | 24019.1 |
| glutamine abc transporter atp-binding protein | BK658_05570 | Not Available | Positive | 1194294 - 1195076 | 29281.8 |
| glutamine abc transporter substrate-binding protein | BK658_05575 | Not Available | Positive | 1195073 - 1195957 | 32165.4 |
| atp-binding protein | BK658_05580 | Not Available | Negative | 1196015 - 1197175 | 42421.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
