Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | BK658_05485 | Not Available | Positive | 1178040 - 1179959 | 71916.5 |
| duf2292 domain-containing protein | BK658_05490 | Not Available | Positive | 1180278 - 1180460 | 6722.01 |
| abc transporter permease | BK658_05495 | Not Available | Positive | 1180604 - 1181617 | 36876.6 |
| sulfate abc transporter permease subunit cyst | BK658_05500 | Not Available | Positive | 1181689 - 1182507 | 29408.3 |
| sulfate abc transporter permease subunit cysw | BK658_05505 | Not Available | Positive | 1182521 - 1183393 | 31451.1 |
| sulfate abc transporter atp-binding protein | BK658_05510 | Not Available | Positive | 1183397 - 1184386 | 36823.1 |
| hypothetical protein | BK658_05515 | Not Available | Negative | 1184504 - 1185028 | 19011.7 |
| crp/fnr family transcriptional regulator | BK658_05520 | Not Available | Positive | 1185114 - 1185800 | 25785.6 |
| response regulator | BK658_05525 | Not Available | Positive | 1185889 - 1186254 | 13666.6 |
| arac family transcriptional regulator | BK658_05530 | Not Available | Negative | 1186416 - 1187420 | 37777.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
