Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_05435 | Not Available | Positive | 1167450 - 1167629 | 6850.84 |
| hypothetical protein | BK658_05440 | Not Available | Negative | 1167630 - 1168229 | 22917.1 |
| fatty acid hydroxylase | BK658_05445 | Not Available | Negative | 1168655 - 1169530 | 33139.9 |
| arac family transcriptional regulator | BK658_05450 | Not Available | Positive | 1169600 - 1170583 | 37432.0 |
| Trna-arg | Not Available | Not Available | Positive | 1170663 - 1170739 | Not Available |
| succinate-semialdehyde dehydrogenase i | BK658_05460 | Not Available | Positive | 1171089 - 1172531 | 51505.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | BK658_05465 | Not Available | Positive | 1172708 - 1173985 | 44975.8 |
| histidine kinase | BK658_05470 | Not Available | Positive | 1174122 - 1175336 | 44577.2 |
| diguanylate cyclase | BK658_05475 | Not Available | Negative | 1175479 - 1176468 | 37247.0 |
| acyl-coa desaturase | BK658_05480 | Not Available | Negative | 1176714 - 1177892 | 45108.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
