Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fusaric acid resistance protein | BK658_05385 | Not Available | Positive | 1153521 - 1155599 | 76994.2 |
| hypothetical protein | BK658_05390 | Not Available | Positive | 1155596 - 1155805 | 7839.01 |
| efflux transporter periplasmic adaptor subunit | BK658_05395 | Not Available | Positive | 1155802 - 1156692 | 32870.4 |
| rnd transporter | BK658_05400 | Not Available | Positive | 1156689 - 1158137 | 51366.7 |
| nadh:ubiquinone oxidoreductase subunit n | BK658_05405 | Not Available | Positive | 1158221 - 1158856 | 24206.1 |
| hypothetical protein | BK658_05410 | Not Available | Positive | 1159142 - 1160653 | 53535.7 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | BK658_05415 | Not Available | Positive | 1160956 - 1163436 | 91504.3 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase | BK658_05420 | Not Available | Positive | 1163449 - 1165446 | 74370.6 |
| poly-beta-1,6 n-acetyl-d-glucosamine synthase | BK658_05425 | Not Available | Positive | 1165448 - 1166809 | 51584.3 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | BK658_05430 | Not Available | Positive | 1166806 - 1167327 | 19846.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
