Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin secretion protein d | BK658_05235 | Not Available | Positive | 1117624 - 1118991 | 50705.4 |
| taurine dioxygenase | BK658_05240 | Not Available | Positive | 1119310 - 1120206 | 33487.8 |
| nitrate abc transporter substrate-binding protein | BK658_05245 | Not Available | Positive | 1120233 - 1121258 | 37155.2 |
| sulfonate abc transporter atp-binding protein | BK658_05250 | Not Available | Positive | 1121264 - 1122124 | 31817.6 |
| abc transporter permease | BK658_05255 | Not Available | Positive | 1122144 - 1123010 | 31821.7 |
| hypothetical protein | BK658_05260 | Not Available | Negative | 1122979 - 1123728 | 28087.7 |
| outer membrane assembly lipoprotein yfio | BK658_05265 | Not Available | Negative | 1123732 - 1125903 | 79460.8 |
| efflux transporter periplasmic adaptor subunit | BK658_05270 | Not Available | Positive | 1126067 - 1126849 | 27683.0 |
| hlyd family secretion protein | BK658_05275 | Not Available | Positive | 1126846 - 1128165 | 47784.6 |
| peptidase m50 | BK658_05280 | Not Available | Positive | 1128166 - 1130262 | 78185.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
