Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine phosphatase | BK658_05175 | Not Available | Positive | 1100132 - 1100788 | 24790.5 |
| hypothetical protein | BK658_05180 | Not Available | Negative | 1100894 - 1101319 | 15577.9 |
| plp-dependent threonine dehydratase | BK658_05185 | Not Available | Negative | 1101359 - 1102873 | 55005.0 |
| ribose 5-phosphate isomerase a | BK658_05190 | Not Available | Positive | 1103018 - 1103692 | 23536.4 |
| dna-binding protein | BK658_05195 | Not Available | Negative | 1103818 - 1104771 | 35515.4 |
| hypothetical protein | BK658_05200 | Not Available | Negative | 1104716 - 1105381 | 23584.6 |
| fad-binding oxidoreductase | BK658_05205 | Not Available | Negative | 1105422 - 1106816 | 51144.9 |
| d-3-phosphoglycerate dehydrogenase | BK658_05210 | Not Available | Positive | 1107021 - 1108250 | 44238.3 |
| channel protein tolc | BK658_05225 | Not Available | Positive | 1114088 - 1115440 | 49719.7 |
| abc transporter | BK658_05230 | Not Available | Positive | 1115478 - 1117634 | 78700.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
