Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | BK658_04725 | Not Available | Positive | 1005051 - 1006220 | 39936.1 |
| acyl-coa thioesterase | BK658_04730 | Not Available | Negative | 1006408 - 1006812 | 15112.1 |
| adenosylhomocysteinase | BK658_04735 | Not Available | Positive | 1007136 - 1008545 | 51496.8 |
| methylenetetrahydrofolate reductase | BK658_04740 | Not Available | Positive | 1008713 - 1009558 | 31262.0 |
| hypothetical protein | BK658_04745 | Not Available | Positive | 1009646 - 1010728 | 41341.6 |
| amino acid abc transporter substrate-binding protein | BK658_04750 | Not Available | Positive | 1010785 - 1011600 | 30466.3 |
| dead/deah box helicase | BK658_04755 | Not Available | Positive | 1011828 - 1013684 | 67111.8 |
| hypothetical protein | BK658_04760 | Not Available | Negative | 1013751 - 1014329 | 20627.4 |
| cytochrome b | BK658_04765 | Not Available | Negative | 1014362 - 1014913 | 20001.7 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | BK658_04770 | Not Available | Positive | 1015236 - 1016642 | 52525.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
