Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| erythrose-4-phosphate dehydrogenase | BK658_04675 | Not Available | Negative | 993468 - 994553 | 39213.7 |
| transketolase | BK658_04680 | Not Available | Negative | 994705 - 996702 | 72517.8 |
| arsr family transcriptional regulator | BK658_04685 | Not Available | Positive | 996976 - 997971 | 35999.0 |
| methionine adenosyltransferase | BK658_04690 | Not Available | Positive | 997990 - 999180 | 42625.6 |
| dna ligase b | BK658_04695 | Not Available | Positive | 999339 - 1001021 | 62594.7 |
| hypothetical protein | BK658_04700 | Not Available | Positive | 1001119 - 1001514 | 14470.3 |
| cytochrome c | BK658_04705 | Not Available | Negative | 1001709 - 1002158 | 16261.6 |
| transglycosylase | BK658_04710 | Not Available | Positive | 1002287 - 1003471 | 42390.5 |
| hypothetical protein | BK658_04715 | Not Available | Negative | 1003600 - 1003983 | 14027.4 |
| eama family transporter | BK658_04720 | Not Available | Negative | 1004019 - 1004852 | 30974.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
