Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase c69 | BK658_04575 | Not Available | Positive | 970619 - 972061 | 52260.6 |
| zn-dependent protease | BK658_04580 | Not Available | Positive | 972061 - 973398 | 47955.5 |
| mfs transporter | BK658_04585 | Not Available | Positive | 973540 - 974967 | 50673.9 |
| atp-dependent rna helicase dbpa | BK658_04590 | Not Available | Positive | 975025 - 976410 | 49832.6 |
| hypothetical protein | BK658_04595 | Not Available | Positive | 976544 - 977722 | 42602.1 |
| tigr01666 family membrane protein | BK658_04600 | Not Available | Positive | 978012 - 980195 | 80642.2 |
| amino acid abc transporter substrate-binding protein | BK658_04605 | Not Available | Negative | 980354 - 981091 | 27630.0 |
| gnat family n-acetyltransferase | BK658_04610 | Not Available | Positive | 981357 - 981809 | 16956.4 |
| hypothetical protein | BK658_04615 | Not Available | Negative | 981933 - 982229 | 11157.3 |
| metal-dependent hydrolase | BK658_04620 | Not Available | Negative | 982257 - 982748 | 19076.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
