Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | BK658_04525 | Not Available | Negative | 956207 - 957310 | 40971.6 |
| l-serine ammonia-lyase | BK658_04530 | Not Available | Negative | 957908 - 959284 | 49164.4 |
| glycine/betaine abc transporter substrate-binding protein | BK658_04535 | Not Available | Positive | 959714 - 960664 | 34404.5 |
| choline abc transporter permease subunit | BK658_04540 | Not Available | Positive | 960731 - 961579 | 30459.5 |
| choline abc transporter atp-binding protein | BK658_04545 | Not Available | Positive | 961576 - 962754 | 43702.4 |
| beta-aspartyl-peptidase | BK658_04550 | Not Available | Negative | 963005 - 965002 | 73247.2 |
| transcriptional regulator beti | BK658_04555 | Not Available | Positive | 965429 - 966034 | 22400.1 |
| betaine-aldehyde dehydrogenase | BK658_04560 | Not Available | Positive | 966131 - 967603 | 53078.2 |
| choline dehydrogenase | BK658_04565 | Not Available | Positive | 967818 - 969521 | 62685.6 |
| methyltransferase | BK658_04570 | Not Available | Positive | 969780 - 970475 | 24036.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
