Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_04425 | Not Available | Positive | 934686 - 934988 | 11162.6 |
| transposase | BK658_04430 | Not Available | Positive | 935143 - 935676 | 21245.4 |
| hybrid-cluster nad(p)-dependent oxidoreductase | BK658_04435 | Not Available | Negative | 935853 - 936953 | 40539.8 |
| rieske (2fe-2s) protein | BK658_04440 | Not Available | Positive | 937237 - 938532 | 48939.4 |
| gnat family n-acetyltransferase | BK658_04445 | Not Available | Negative | 939406 - 939972 | 21089.1 |
| electron transfer flavoprotein subunit beta | BK658_04450 | Not Available | Negative | 940095 - 940865 | 26838.6 |
| electron transfer flavoprotein subunit alpha | BK658_04455 | Not Available | Negative | 940881 - 942101 | 43309.7 |
| (fe-s)-binding protein | BK658_04460 | Not Available | Negative | 942101 - 944050 | 70330.8 |
| n-methylproline demethylase | BK658_04465 | Not Available | Negative | 944201 - 946261 | 75590.8 |
| hydrocarbon binding protein | BK658_04470 | Not Available | Negative | 946277 - 946807 | 19796.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
