Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | BK658_04375 | Not Available | Positive | 922821 - 923033 | 7705.03 |
| hypothetical protein | BK658_04380 | Not Available | Positive | 923310 - 923738 | 15295.2 |
| formaldehyde dehydrogenase, glutathione-independent | BK658_04385 | Not Available | Negative | 923803 - 925002 | 42186.9 |
| formyltetrahydrofolate deformylase | BK658_04390 | Not Available | Negative | 925211 - 926068 | 32210.5 |
| sarcosine oxidase subunit gamma | BK658_04395 | Not Available | Negative | 926225 - 926857 | 22854.5 |
| sarcosine oxidase subunit alpha | BK658_04400 | Not Available | Negative | 926910 - 929927 | 109499.0 |
| sarcosine oxidase subunit delta | BK658_04405 | Not Available | Negative | 929924 - 930253 | 12521.7 |
| sarcosine oxidase subunit beta | BK658_04410 | Not Available | Negative | 930410 - 931660 | 45216.0 |
| serine hydroxymethyltransferase | BK658_04415 | Not Available | Negative | 931684 - 932937 | 44620.4 |
| threonine aldolase | BK658_04420 | Not Available | Positive | 933297 - 934337 | 38213.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
