Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | BK658_04225 | Not Available | Negative | 889375 - 891153 | 63797.0 |
| ggdef domain-containing protein | BK658_04230 | Not Available | Negative | 891490 - 892779 | 48126.8 |
| acyl-coa dehydrogenase | BK658_04235 | Not Available | Negative | 893001 - 894806 | 65588.7 |
| pyrroloquinoline quinone biosynthesis protein pqqe | BK658_04240 | Not Available | Negative | 895084 - 895380 | 10210.8 |
| dethiobiotin synthase | BK658_04245 | Not Available | Negative | 895488 - 896168 | 23529.7 |
| malonyl-[acyl-carrier protein] o-methyltransferase bioc | BK658_04250 | Not Available | Negative | 896165 - 896977 | 29220.1 |
| transporter | BK658_04255 | Not Available | Negative | 896970 - 897701 | 25880.9 |
| 8-amino-7-oxononanoate synthase | BK658_04260 | Not Available | Negative | 897694 - 898872 | 41666.2 |
| biotin synthase biob | BK658_04265 | Not Available | Negative | 899045 - 900100 | 38766.4 |
| amidophosphoribosyltransferase | BK658_04270 | Not Available | Positive | 900191 - 900931 | 27321.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
