Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-nitrogen hydrolase | BK658_04175 | Not Available | Positive | 877411 - 878205 | 29019.5 |
| coenzyme pqq biosynthesis protein pqqf | BK658_04180 | Not Available | Positive | 878254 - 880737 | 90705.0 |
| pyrroloquinoline quinone biosynthesis protein pqqb | BK658_04185 | Not Available | Positive | 881036 - 881947 | 33229.6 |
| pyrroloquinoline quinone biosynthesis protein pqqc | BK658_04190 | Not Available | Positive | 882076 - 882828 | 29034.4 |
| pyrroloquinoline quinone biosynthesis protein pqqd | BK658_04195 | Not Available | Positive | 882825 - 883100 | 10204.2 |
| pyrroloquinoline quinone biosynthesis protein pqqe | BK658_04200 | Not Available | Positive | 883072 - 884247 | 44065.7 |
| s9 family peptidase | BK658_04205 | Not Available | Positive | 884213 - 886045 | 66725.0 |
| aspartate aminotransferase family protein | BK658_04210 | Not Available | Negative | 886135 - 887412 | 45582.7 |
| mosc domain-containing protein | BK658_04215 | Not Available | Negative | 887409 - 888107 | 26640.8 |
| lysr family transcriptional regulator | BK658_04220 | Not Available | Positive | 888209 - 889138 | 34647.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
