Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate acyltransferase | BK658_04125 | Not Available | Positive | 863433 - 864002 | 20210.5 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | BK658_04130 | Not Available | Negative | 864039 - 865064 | 36363.1 |
| 30s ribosomal protein s21 | BK658_04135 | Not Available | Positive | 865264 - 865479 | 8386.25 |
| dna primase | BK658_04140 | Not Available | Positive | 865970 - 867931 | 72720.2 |
| rna polymerase sigma factor rpod | BK658_04145 | Not Available | Positive | 867999 - 869846 | 69324.9 |
| bifunctional diguanylate cyclase/phosphodiesterase | BK658_04150 | Not Available | Positive | 869970 - 873713 | 139807.0 |
| Trna-met | Not Available | Not Available | Positive | 873729 - 873805 | Not Available |
| lipopolysaccharide biosynthesis protein | BK658_04160 | Not Available | Positive | 874211 - 875005 | 29939.0 |
| asnc family transcriptional regulator | BK658_04165 | Not Available | Positive | 875114 - 875575 | 16802.4 |
| amine oxidase | BK658_04170 | Not Available | Positive | 875716 - 877398 | 62330.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
