Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase | BK658_04075 | Not Available | Positive | 853300 - 854118 | 30200.4 |
| co2+/mg2+ efflux protein apag | BK658_04080 | Not Available | Positive | 854242 - 854622 | 13756.4 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | BK658_04085 | Not Available | Positive | 854622 - 855503 | 32983.8 |
| thiosulfate sulfurtransferase | BK658_04090 | Not Available | Positive | 855537 - 855866 | 11755.6 |
| prka family serine protein kinase | BK658_04095 | Not Available | Positive | 856154 - 858076 | 73828.7 |
| hypothetical protein | BK658_04100 | Not Available | Positive | 858284 - 859555 | 48675.7 |
| spovr family protein | BK658_04105 | Not Available | Positive | 859552 - 861114 | 61073.2 |
| multifunctional cca trna nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase | BK658_04110 | Not Available | Positive | 861178 - 862401 | 45779.0 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | BK658_04115 | Not Available | Negative | 862496 - 863014 | 18907.9 |
| dihydroneopterin aldolase | BK658_04120 | Not Available | Negative | 863005 - 863358 | 13121.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
