Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter atp-binding protein | BK658_04025 | Not Available | Negative | 839926 - 841053 | 41234.7 |
| dna-binding response regulator | BK658_04030 | Not Available | Negative | 841328 - 841957 | 22774.0 |
| histidine kinase | BK658_04035 | Not Available | Negative | 842041 - 844431 | 89152.0 |
| hydrolase or acyltransferase | BK658_04040 | Not Available | Positive | 844506 - 845495 | 34928.5 |
| molecular chaperone djla | BK658_04045 | Not Available | Negative | 845596 - 846363 | 28293.1 |
| mannose-1-phosphate guanylyltransferase | BK658_04050 | Not Available | Negative | 846365 - 847036 | 24037.8 |
| aminoglycoside phosphotransferase | BK658_04055 | Not Available | Negative | 847033 - 848058 | 38703.5 |
| lps biosynthesis protein | BK658_04060 | Not Available | Positive | 848189 - 851020 | 106042.0 |
| molecular chaperone sura | BK658_04065 | Not Available | Positive | 851001 - 852317 | 48807.2 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | BK658_04070 | Not Available | Positive | 852314 - 853303 | 35172.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
