Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-nitropropane dioxygenase | BK658_03925 | Not Available | Positive | 819271 - 820239 | 34500.5 |
| hypothetical protein | BK658_03930 | Not Available | Positive | 820321 - 821241 | 32685.2 |
| short-chain dehydrogenase | BK658_03935 | Not Available | Positive | 821304 - 822092 | 28960.6 |
| histidine triad nucleotide-binding protein | BK658_03940 | Not Available | Positive | 822180 - 822518 | 12724.5 |
| demethoxyubiquinone hydroxylase family protein | BK658_03945 | Not Available | Positive | 822693 - 823340 | 23942.8 |
| s-adenosylmethionine decarboxylase | BK658_03950 | Not Available | Negative | 823417 - 824211 | 30239.7 |
| peroxiredoxin | BK658_03955 | Not Available | Negative | 824450 - 824872 | 15078.4 |
| transcriptional regulator crp | BK658_03960 | Not Available | Positive | 825111 - 825755 | 24302.6 |
| lipoate--protein ligase | BK658_03965 | Not Available | Negative | 825752 - 826453 | 25478.5 |
| indole-3-glycerol-phosphate synthase | BK658_03970 | Not Available | Negative | 826521 - 827357 | 30327.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
