Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_03875 | Not Available | Negative | 809270 - 809803 | 20488.4 |
| hypothetical protein | BK658_03880 | Not Available | Negative | 809831 - 810169 | 12708.2 |
| type vi secretion protein impa | BK658_03885 | Not Available | Positive | 810489 - 812426 | 72284.4 |
| hypothetical protein | BK658_03890 | Not Available | Positive | 812445 - 812879 | 16142.4 |
| tyrosine--trna ligase | BK658_03895 | Not Available | Negative | 813127 - 814326 | 44224.3 |
| peptidase m23 | BK658_03900 | Not Available | Positive | 814536 - 815954 | 51079.8 |
| anhydro-n-acetylmuramic acid kinase | BK658_03905 | Not Available | Positive | 815958 - 817049 | 38440.1 |
| iron-sulfur cluster insertion protein erpa | BK658_03910 | Not Available | Negative | 817117 - 817467 | 12515.5 |
| n-acetyl-gamma-glutamyl-phosphate reductase | BK658_03915 | Not Available | Negative | 817635 - 818669 | 36714.2 |
| tigr00701 family protein | BK658_03920 | Not Available | Positive | 818805 - 819236 | 16596.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
