Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | BK658_03775 | Not Available | Negative | 784375 - 785091 | 25389.5 |
| serine/threonine protein kinase | BK658_03780 | Not Available | Negative | 785091 - 788099 | 108386.0 |
| serine/threonine protein phosphatase | BK658_03785 | Not Available | Negative | 788096 - 788827 | 26143.5 |
| type vi secretion-associated protein | BK658_03790 | Not Available | Negative | 788828 - 789478 | 23173.7 |
| type vi secretion protein icmf | BK658_03795 | Not Available | Negative | 789475 - 792975 | 129030.0 |
| hypothetical protein | BK658_03800 | Not Available | Negative | 792972 - 794270 | 47257.0 |
| type vi secretion system-associated protein | BK658_03805 | Not Available | Negative | 794277 - 795611 | 48557.3 |
| type vi secretion system-associated lipoprotein | BK658_03810 | Not Available | Negative | 795627 - 796133 | 18280.8 |
| type vi secretion protein | BK658_03815 | Not Available | Negative | 796209 - 797606 | 51235.9 |
| type vi secretion protein impa | BK658_03820 | Not Available | Positive | 798012 - 799055 | 37704.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
