Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_03725 | Not Available | Negative | 773911 - 774843 | 34731.2 |
| hypothetical protein | BK658_03730 | Not Available | Negative | 774913 - 775437 | 17635.9 |
| type vi secretion protein | BK658_03735 | Not Available | Negative | 775448 - 775855 | 14901.8 |
| type vi secretion protein | BK658_03740 | Not Available | Negative | 775869 - 777344 | 55616.9 |
| type vi secretion system-associated protein | BK658_03745 | Not Available | Negative | 777373 - 777876 | 18315.1 |
| type vi secretion system impa domain-containing protein | BK658_03750 | Not Available | Negative | 777909 - 779465 | 58608.4 |
| hypothetical protein | BK658_03755 | Not Available | Positive | 779865 - 780044 | 6898.82 |
| type vi secretion-associated lipoprotein tagq | BK658_03760 | Not Available | Negative | 780443 - 781372 | 32595.5 |
| type vi secretion protein | BK658_03765 | Not Available | Negative | 781459 - 783186 | 63118.1 |
| hypothetical protein | BK658_03770 | Not Available | Negative | 783179 - 784375 | 42517.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
