Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_03675 | Not Available | Negative | 763669 - 764868 | 44363.3 |
| type vi secretion protein | BK658_03680 | Not Available | Negative | 764886 - 765026 | 5050.12 |
| sigma-54-dependent fis family transcriptional regulator | BK658_03685 | Not Available | Negative | 765366 - 766883 | 55304.6 |
| clpv1 family t6ss atpase | BK658_03690 | Not Available | Negative | 766894 - 769548 | 96384.7 |
| type vi secretion protein | BK658_03695 | Not Available | Negative | 769560 - 770567 | 38624.3 |
| type vi secretion protein | BK658_03700 | Not Available | Negative | 770531 - 772318 | 68022.9 |
| hypothetical protein | BK658_03705 | Not Available | Negative | 772402 - 772824 | 15564.7 |
| hypothetical protein | BK658_03710 | Not Available | Negative | 772821 - 773039 | 7816.9 |
| hypothetical protein | BK658_03715 | Not Available | Negative | 773045 - 773437 | 15065.4 |
| hypothetical protein | BK658_03720 | Not Available | Negative | 773483 - 773908 | 16478.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
