Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylglutamate kinase | BK658_03520 | Not Available | Positive | 728977 - 729882 | 31920.3 |
| orotate phosphoribosyltransferase | BK658_03525 | Not Available | Negative | 730047 - 730691 | 23022.6 |
| exodeoxyribonuclease iii | BK658_03530 | Not Available | Positive | 730774 - 731553 | 29826.3 |
| orotate phosphoribosyltransferase | BK658_03535 | Not Available | Negative | 731729 - 732097 | 13594.9 |
| ribonuclease ph | BK658_03540 | Not Available | Negative | 732132 - 732854 | 25793.1 |
| yicc family protein | BK658_03545 | Not Available | Positive | 733125 - 733988 | 32059.5 |
| guanylate kinase | BK658_03550 | Not Available | Positive | 734001 - 734621 | 23608.1 |
| dna-directed rna polymerase subunit omega | BK658_03555 | Not Available | Positive | 734790 - 735053 | 9841.61 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase | BK658_03560 | Not Available | Positive | 735111 - 737216 | 78521.5 |
| reactive intermediate/imine deaminase | BK658_03565 | Not Available | Positive | 737253 - 737633 | 13497.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
