Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | BK658_03315 | Not Available | Positive | 682489 - 683436 | 34592.2 |
| l-lysine 6-monooxygenase | BK658_03320 | Not Available | Positive | 683487 - 684833 | 50311.7 |
| 2,3-diaminopropionate biosynthesis protein sbnb | BK658_03330 | Not Available | Positive | 685771 - 686826 | 38209.4 |
| fad-nad(p)-binding domain protein | BK658_03335 | Not Available | Positive | 686829 - 688547 | 63369.6 |
| threonine transporter | BK658_03340 | Not Available | Positive | 688639 - 689283 | 22776.4 |
| alcohol dehydrogenase | BK658_03345 | Not Available | Positive | 689332 - 690486 | 40704.1 |
| esterase | BK658_03350 | Not Available | Positive | 690508 - 691647 | 40030.5 |
| transcriptional regulator ftra | BK658_03355 | Not Available | Negative | 691708 - 692661 | 35132.3 |
| thiamine biosynthesis protein thij | BK658_03360 | Not Available | Positive | 692793 - 693398 | 22070.3 |
| lysr family transcriptional regulator | BK658_03365 | Not Available | Positive | 693689 - 693964 | 9886.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
