Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | BK658_03265 | Not Available | Positive | 672818 - 673522 | 26127.1 |
| hypothetical protein | BK658_03270 | Not Available | Negative | 673723 - 674049 | 11484.9 |
| hypothetical protein | BK658_03275 | Not Available | Negative | 674152 - 674577 | 15695.8 |
| ammonia channel protein | BK658_03280 | Not Available | Negative | 674792 - 676129 | 46172.5 |
| transcriptional regulator | BK658_03285 | Not Available | Negative | 676163 - 676501 | 12330.9 |
| hypothetical protein | BK658_03290 | Not Available | Positive | 676915 - 677175 | 9452.32 |
| phage antirepressor protein | BK658_03295 | Not Available | Positive | 677596 - 678123 | 20679.0 |
| cupin | BK658_03300 | Not Available | Positive | 679452 - 679844 | 14802.3 |
| methionine--trna ligase | BK658_03305 | Not Available | Positive | 679837 - 681336 | 55610.1 |
| fad-binding oxidoreductase | BK658_03310 | Not Available | Positive | 681350 - 682492 | 40241.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
