Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate cyclase | BK658_03215 | Not Available | Positive | 664578 - 667427 | 108541.0 |
| nucleoside diphosphate kinase regulator | BK658_03220 | Not Available | Negative | 667434 - 667844 | 14712.5 |
| hypothetical protein | BK658_03225 | Not Available | Positive | 667843 - 668055 | 7739.18 |
| hypothetical protein | BK658_03230 | Not Available | Negative | 668115 - 668333 | 8044.58 |
| iron donor protein cyay | BK658_03235 | Not Available | Negative | 668338 - 668670 | 12407.3 |
| hypothetical protein | BK658_03240 | Not Available | Positive | 668909 - 669088 | 6210.32 |
| diaminopimelate decarboxylase | BK658_03245 | Not Available | Positive | 669098 - 670345 | 45177.9 |
| diaminopimelate epimerase | BK658_03250 | Not Available | Positive | 670350 - 671180 | 30196.4 |
| hypothetical protein | BK658_03255 | Not Available | Positive | 671194 - 671919 | 26991.3 |
| tyrosine recombinase xerc | BK658_03260 | Not Available | Positive | 671922 - 672821 | 33704.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
