Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| disulfide bond formation protein b | BK658_03165 | Not Available | Negative | 655057 - 655608 | 20202.8 |
| heme biosynthesis protein hemy | BK658_03170 | Not Available | Negative | 655839 - 657077 | 46144.4 |
| heme biosynthesis operon protein hemx | BK658_03175 | Not Available | Negative | 657074 - 658198 | 40932.3 |
| uroporphyrinogen-iii synthase | BK658_03180 | Not Available | Negative | 658215 - 658979 | 27685.6 |
| hydroxymethylbilane synthase | BK658_03185 | Not Available | Negative | 658976 - 659917 | 33699.4 |
| dna-binding response regulator | BK658_03190 | Not Available | Negative | 660056 - 660802 | 27570.5 |
| argininosuccinate lyase | BK658_03195 | Not Available | Positive | 661301 - 662695 | 51578.6 |
| glutathione s-transferase | BK658_03200 | Not Available | Negative | 662811 - 663470 | 23866.2 |
| hypothetical protein | BK658_03205 | Not Available | Positive | 663596 - 663880 | 10689.4 |
| tigr02647 family protein | BK658_03210 | Not Available | Positive | 664148 - 664393 | 8694.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
