Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_03115 | Not Available | Positive | 645955 - 647352 | 50852.6 |
| hypothetical protein | BK658_03120 | Not Available | Positive | 647366 - 647737 | 13284.2 |
| penicillin-binding protein activator lpob | BK658_03125 | Not Available | Positive | 647772 - 648359 | 21481.7 |
| penicillin-binding protein activator lpob | BK658_03130 | Not Available | Positive | 648363 - 649106 | 26952.0 |
| threonine transporter rhtb | BK658_03135 | Not Available | Negative | 649170 - 649802 | 22687.6 |
| abc transporter atp-binding protein | BK658_03140 | Not Available | Negative | 649991 - 651901 | 71061.6 |
| tigr02444 family protein | BK658_03145 | Not Available | Positive | 651952 - 652416 | 16991.4 |
| transcriptional regulator | BK658_03150 | Not Available | Negative | 652413 - 653495 | 35243.8 |
| peptidylprolyl isomerase | BK658_03155 | Not Available | Positive | 653688 - 654353 | 23821.5 |
| anti-rna polymerase sigma 70 factor | BK658_03160 | Not Available | Negative | 654423 - 654881 | 17271.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
