Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | BK658_03065 | Not Available | Positive | 633790 - 634440 | 23567.3 |
| amino acid abc transporter atp-binding protein | BK658_03070 | Not Available | Positive | 634427 - 635164 | 26819.8 |
| exopolyphosphatase | BK658_03075 | Not Available | Positive | 635395 - 636897 | 56424.9 |
| rna degradosome polyphosphate kinase | BK658_03080 | Not Available | Negative | 636957 - 639182 | 83140.6 |
| delta-aminolevulinic acid dehydratase | BK658_03085 | Not Available | Negative | 639201 - 640214 | 37011.3 |
| hypothetical protein | BK658_03090 | Not Available | Positive | 640422 - 641054 | 23866.5 |
| hypothetical protein | BK658_03095 | Not Available | Negative | 641035 - 642270 | 47072.4 |
| isoprenoid biosynthesis protein elbb | BK658_03100 | Not Available | Positive | 642386 - 643054 | 23258.0 |
| duf188 domain-containing protein | BK658_03105 | Not Available | Negative | 643172 - 643627 | 16446.1 |
| cystathionine gamma-synthase | BK658_03110 | Not Available | Negative | 643748 - 645646 | 67768.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
