Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfonate abc transporter substrate-binding protein | BK658_02860 | Not Available | Negative | 591126 - 592094 | 34747.0 |
| nad(p)h-dependent fmn reductase | BK658_02865 | Not Available | Negative | 592184 - 592777 | 21601.2 |
| peroxidase | BK658_02870 | Not Available | Negative | 593133 - 593771 | 24020.3 |
| porin | BK658_02875 | Not Available | Negative | 594062 - 595450 | 49863.8 |
| amino-acid n-acetyltransferase | BK658_02880 | Not Available | Negative | 595984 - 597282 | 47700.3 |
| acetylornithine deacetylase | BK658_02885 | Not Available | Negative | 597421 - 598569 | 41322.9 |
| adenylate cyclase | BK658_02890 | Not Available | Positive | 598728 - 600095 | 52312.5 |
| asnc family transcriptional regulator | BK658_02895 | Not Available | Negative | 600222 - 600692 | 17708.5 |
| hypothetical protein | BK658_02900 | Not Available | Positive | 600818 - 601156 | 12356.8 |
| type ii secretion system protein e | BK658_02905 | Not Available | Positive | 601297 - 603078 | 66296.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
