Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome maturation factor rimm | BK658_02705 | Not Available | Negative | 559794 - 560333 | 20081.2 |
| 30s ribosomal protein s16 | BK658_02710 | Not Available | Negative | 560339 - 560590 | 9222.04 |
| signal recognition particle protein | BK658_02715 | Not Available | Negative | 560840 - 562216 | 49364.9 |
| inner membrane protein ypjd | BK658_02720 | Not Available | Positive | 562425 - 563237 | 29416.2 |
| transporter | BK658_02725 | Not Available | Positive | 563250 - 564515 | 46464.3 |
| mfs transporter | BK658_02730 | Not Available | Positive | 564587 - 565903 | 46677.7 |
| hypothetical protein | BK658_02735 | Not Available | Negative | 566195 - 566662 | 17079.6 |
| atpase | BK658_02740 | Not Available | Negative | 566933 - 567370 | 15394.7 |
| cystine abc transporter substrate-binding protein | BK658_02745 | Not Available | Positive | 567503 - 568276 | 28238.8 |
| purine-nucleoside phosphorylase | BK658_02750 | Not Available | Negative | 568383 - 568886 | 17458.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
